Hi, I'm Lawrence

Research Scientist and Team Lead with expertise in bioinformatics, genome editing, and machine learning. Led teams in developing innovative solutions for genomic research.

Lawrence Profile
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About Me

I'm a research scientist and team lead specializing in bioinformatics, with extensive experience in genome editing, machine learning, and large-scale biological data analysis. I led initiatives that contributed to significant company growth and patent development.

CRISPR & Gene Editing

Led discovery of 100+ novel gene editing systems and developed efficiency prediction models

AI & Machine Learning

Built CNN models, LLMs with RAG systems, and advanced data mining algorithms

Team Leadership

Led bioinformatics teams and managed projects contributing to significant company growth and patent development

0 Years Experience
0 Patents Contributed
0 Publications

Professional Experience

May 2022 - May 2025

Research Scientist (Bioinformatics) - Team Lead

GenEditBio Limited, Hong Kong

  • Led bioinformatics team developing data analysis pipelines for genomic research
  • Built CNN-based deep learning model to predict genome editing efficiency
  • Created LLM with Ollama base model and JSON-based RAG for in-house queries
  • Developed Nextflow pipelines for NGS data analysis in genome editing
  • Led data mining resulting in 100+ novel gene editing systems for patents
  • Designed LIMS system (BIKALIMS) with AWS S3 integration
Nextflow Deep Learning LLM AWS S3 Team Leadership
May 2021 - May 2022

Junior Research Assistant (Bioinformatics team)

Microbiota I-Center (MagIC) Limited, Hong Kong

  • Conducted metagenomic analysis of human gut microbiome
  • Optimized machine learning algorithms for prediction models
  • Preprocessed NGS data from Illumina NOVASEQ6000 sequencer
  • Managed research and file servers as system administrator
  • Performed data visualizations and ad hoc analyses
Metagenomics Machine Learning System Admin Data Visualization
Aug 2018 - Nov 2019

MSc Biochemical Engineering and Industrial Management

University of Sheffield, United Kingdom

  • Developed nucleofection media for CHO cell lines for biotherapeutics
  • Reviewed high-throughput drug development and design methods
  • Studied gene amplification and selection methods
  • Course Representative
Bioengineering Drug Development Cell Culture

Technical Skills

Programming Languages

Python
R
Nextflow
JavaScript
SQL/NoSQL

Bioinformatics Tools

NGS Analysis
Metagenomics
CRISPR Analysis
Data Mining

Data Science & ML

Machine Learning
Deep Learning (CNN)
LLM Development
Statistical Analysis

Cloud & Infrastructure

AWS S3
Google Cloud
Docker
Slurm/HPC

Featured Projects

GenomePAM

Detects mammalian genome repeats using advanced bioinformatics algorithms for genomic sequence analysis and repeat identification.

Bioinformatics Genomics Sequence Analysis Mammalian Genome

SousSpeed Webapp

Optimize sous vide cooking time using thermodynamic algorithms to significantly shorten cooking times without overcooking.

JavaScript Thermodynamics Algorithms

SplitCheque Webapp

Efficiently split bills with minimal transactions using algorithms to minimize the number of transactions during bill splitting.

JavaScript Optimization Graph Theory

BIKALIMS Platform

In-house Laboratory Information Management System with AWS S3 integration for multimodal data management and visualization.

Python AWS S3 PostgreSQL LIMS

CRISPR Efficiency Predictor

CNN-based deep learning model to predict genome editing efficiency, reducing manual testing and accelerating research.

Python TensorFlow CNN CRISPR

In-House LLM with RAG

Custom LLM built with Ollama base model and JSON-based RAG system for confidential in-house biological queries.

Ollama RAG JSON NLP

Publications & Patents

2025

GenomePAM directs PAM characterization and engineering of CRISPR-Cas nucleases using mammalian genome repeats

Miao Yu, Limei Ai, Bang Wang, Lawrence Ip, James Liu, Linxian Li, Shengdar Tsai, Benjamin P. Kleinstiver, Zongli Zheng

Nature Biomedical Engineering

Nature High Impact
2023

Development of De Novo Mining Platform for Discovery and Identification of Novel Small Class II CRISPR Nucleases

Bang Wang, Nicola W.Y. Wong, Miao Yu, James Liu, XiangYong Oong, Lawrence Ip, Doris Man, Chloe Chen, Ken Chau, Hoi Yee Keung, Zongli Zheng

American Society of Gene & Cell Therapy (Abstract)

Conference CRISPR
2022

Prevotella species in the human gut is primarily comprised of Prevotella copri, Prevotella stercorea, and related lineages

Yun Kit Yeoh, Lawrence Yuk Ting Ip, Francis KL Chan, Siew C Ng

Nature Scientific Reports

Nature Microbiome
2022

Cardiovascular disease risk is reflected in distinct gut microbiota signatures in asymptomatic individuals

Lawrence Yuk Ting Ip, Yun Kit Yeoh, Chun Pan Cheung, Anki Miu, Bonaventure YM Ip, Francis KL Chan, Thomas WH Leung, Siew Chien Ng

Gastroenterology, Digestive Disease Week (Top 10%)

Top 10% Cardiovascular
2023

Serine recombinases, system including serine recombinase and uses thereof

Patent Contributor

PCT/CN2023/122228

Patent Gene Editing
2020-2023

Gene Editing Systems Discovery & Patents

Data Mining & Patent Contribution Lead

Novel Endonuclease, Integrase, and CRISPR-cas systems

Discovery Innovation

Awards & Recognition

Digestive Disease Week 2022

Top 10% - Selected for press program

Harvard CS50 Puzzle Day 2020

Ranked 7/8 in competitive programming

Texas Instruments Hackathon

Sheffield 2018 - Innovation Award

MSc Course Representative

University of Sheffield 2018-2019

Get In Touch

Let's Connect

I'm always interested in discussing new opportunities, collaborations, or just talking about bioinformatics!

LinkedIn

linkedin.com/in/lawrence-ip

GitHub

github.com/lawrence-ip

ORCID

0000-0002-4257-2758